Majumder, S, Rixner, S, and Pai, VS (2004).
An Event-driven Architecture for MPI Libraries
In: Proceedings of the LACSI Symposium, Los Alamos, New Mexico, Los Alamos Computer Science Institute.

Marin, G and Mellor-Crummey, J (2004).
Cross-Architecture Performance Predictions for Scientific Applications Using Parameterized Models
In: Proceedings of the Joint International Conference on Measurement and Modeling of Computer Systems, pp. 2-13, New York, NY, ACM Press.

Marowka, A, Lui, Z, and Chapman, B (2004).
OpenMP-Oriented Applications for Distributed Shared Memory Architectures
Concurrency and Computation: Practice and Experience, Volume 16(4):pp. 371-384.

Marsden, AL, Wang, M, and Moin, P (2004).
Suppression Of Vortex-Shedding Noise Via Derivative-Free Shape
Physics of Fluids, Volume 16(10):pp. L83-L86.

Marsden, AL, Wang, M, Dennis, JJ, and Moin, P (2004).
Optimal Aeroacoustic Shape Design Using the Surrogate Management Framework: Surrogate Optimization
Optimization and Engineering, Volume 5(2):pp. 235-262(28).

McCosh, C, Allen, E, and Kennedy, K (2004).
Object-Oriented Type Inference for Telescoping Languages
Rice University.

McCosh, C, Allen, E, Kennedy, K, and Taha, W (2004).
Static Type Inference for Specialization in a Telescoping Compiler
Rice University.

Mellor-Crummey, J and Garvin, J (2004).
Optimizing Sparse Matrix-Vector Product Computations Using Unroll And Jam
International Journal on High Performance Computing Applications, Volume 18(2):pp. 225-236(12).

Mendes, CL and Reed, DA (2004).
Monitoring Large Systems via Statistical Sampling
The International Journal of High Performance Computing Applications, Volume 18(2):pp.267-277.

Mucci, P, Dongarra, J, Kufrin, R, Moore, S, Song, F, and Wolf, F (2004).
Automating the Large-Scale Collection and Analysis of Performance
In: Proceedings of the 5th LCI International Conference on Linux Clusters: The HPC Revolution, Austin, Texas.

Pai, VS, Rixner, S, and Kim, H (2004).
Isolating The Performance Impacts Of Network Interface Cards Through Microbenchmarks
In: Proceedings Of The Joint International Conference On Measurement And Modeling Of Computer Systems, pp. 430-431, ACM Press.

Qasem, A, Kennedy, K, and Mellor-Crummey, J (2004).
Automatic Tuning of Whole Applications Using Direct Search and a Performance-based Transformation System
In: Proceedings of the LACSI Symposium, Los Alamos, NM, Los Alamos Computer Science Institute.

Reed, DA, Lu, C, and Mendes, CL (2004).
Reliability Challenges in Large Systems
Future Generation Computer Systems Journal.

Sodhi, S and Subhlok, J (2004).
Skeleton Based Performance Prediction on Shared Networks
In: IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2004), pp. 723- 730, IEEE Press.

Vadhiyar, S, Fagg, G, and Dongarra, J (2004).
Towards an Accurate Model for Collective Communications
International Journal of High Performance Computing Applications, Special Issue: Automatic Performance Tuning, Volume 18(1):pp. 159–167.

Villalobos, C, Tapia, R, and Zhang, Y (2004).
Sphere of Convergence of Newton's Method on Two Equivalent Systems from Nonlinear Programming
Journal of Optimization Theory and Applications, Volume 121(Issue 3).

Weng, T and Chapman, B (2004).
Toward Optimization of OpenMP Codes for Synchronization and Data Reuse
International Journal of High Performance Computing and Networking (IJHPCN), Volume 1.

Wolf, F, Mohr, B, Dongarra, J, and Moore, S (2004).
Efficient Pattern Search in Large Traces Through Successive Refinement
In: Euro-Par 2004 Parallel Processing: 10th International Euro-Par Conference, Pisa, Italy, August 31- September 3, 2004. Proceedings, ed. by Marco Danelutto, Marco Vanneschi, Domenico Laforenza, pp. 47, Springer-Verlag GmbH.

Yi, Q and Kennedy, K (2004).
Improving Memory Hierarchy Performance through Combined Loop Interchange and Multi-Level Fusion
International Journal of High Performance Computing Applications, Volume 18(2):pp. 237-253.

Yi, Q, Kennedy, K, You, H, Seymour, K, and Dongarra, J (2004).
Automatic blocking of QR and LU factorizations for locality
In: 2nd ACM SIGPLAN Workshop on Memory System Performance (MSP 2004), pp. 12–22, Washington, DC.

Zhang, Y and Merritt, M (2004).
A Geometric Approach to Fluence Map Optimization in IMRT Cancer Treatment Planning
Rice University, Department of Computational and Applied Mathematics, 6100 Main Street, Houston, TX 77005.

Zhang, Y and Merritt, M (2004).
An Interior-Point Gradient Method for Large-Scale Totally Nonnegative Least Squares Problems
Rice University, Department of Computational and Applied Mathematics, 6100 Main Street, Houston, TX 77005.

Almagor, L, Cooper, KD, Grosul, A, Harvey, TJ, Reeves, SW, Subramanian, D, Torczon, L, and Waterman, T (2003).
Compilation Order Matters: Exploring the Structure of the Space of Compilation Sequences Using Randomized Search Algorithms
Unpublished.

Antoulas, AC, Sorensen, DC, and Gugercin, S (2003).
A modified low-rank Smith method for large-scale Lyapunov equations
Numerical Algorithms, Volume 32(Issue 1):pp. 27-55.

Ayguade, E and Chapman, B (2003).
Selected papers on OpenMP (including papers from the 2001 European Workshop on OpenMP)
Special Issue of Scientific Programming.